Transcript: ENST00000369144.3 EIF3A-001

Description

eukaryotic translation initiation factor 3, subunit A [Source:HGNC Symbol;Acc:3271]

Gene Synonyms

EIF3, EIF3A, EIF3S10, KIAA0139, P167, TIF32, eIF3-p170, eIF3-theta, eIF3a, p180, p185

Location

About this transcript

This transcript has 22 exons, is annotated with 25 domains and features, is associated with 23096 variant alleles and maps to 875 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369144.3	EIF3A-001	5472	1382aa	ENSP00000358140.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7608	F5H335 Q14152	NM_003750.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541549.1	EIF3A-201	4486	1348aa	ENSP00000438178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H335	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000462527.2	EIF3A-002	1192	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 5,472 bps, Translation length: 1,382 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14152

CCDS

This transcript is a member of the Human CCDS set: CCDS7608

Version

ENST00000369144.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000050634 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.