Transcript: ENST00000368849.3 TUFT1-006

Description

tuftelin 1 [Source:HGNC Symbol;Acc:12422]

Location

Chromosome 1: 151,512,781-151,556,059 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 8 domains and features, is associated with 18138 variant alleles and maps to 534 oligo probes.

Gene

This transcript is a product of gene ENSG00000143367.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368849.3	TUFT1-006	3111	390aa	ENSP00000357842.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1000	Q9NNX1	NM_020127.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000368848.2	TUFT1-008	3033	365aa	ENSP00000357841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44223	Q9NNX1	NM_001126337.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392712.3	TUFT1-010	2946	335aa	ENSP00000376476.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVU8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000353024.3	TUFT1-201	2933	331aa	ENSP00000343781.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NNX1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538902.1	TUFT1-202	1767	409aa	ENSP00000437997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H607	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000461859.1	TUFT1-009	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498606.1	TUFT1-012	683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490156.1	TUFT1-011	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,111 bps, Translation length: 390 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NNX1

CCDS

This transcript is a member of the Human CCDS set: CCDS1000

Version

ENST00000368849.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000035022 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000368849.3 TUFT1-006

Summary