Transcript: ENST00000367818.3 XCL1-001

Description

chemokine (C motif) ligand 1 [Source:HGNC Symbol;Acc:10645]

Gene Synonyms

ATAC, LPTN, LTN, SCM-1, SCM-1a, SCM1, SCM1A, SCYC1, lymphotactin

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 2837 variant alleles and maps to 511 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367818.3	XCL1-001	1367	114aa	ENSP00000356792.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1274	P47992	NM_002995.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,367 bps, Translation length: 114 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P47992

CCDS

This transcript is a member of the Human CCDS set: CCDS1274

Version

ENST00000367818.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000083612 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.