Transcript: ENST00000367393.3 C1orf53-001

Description

chromosome 1 open reading frame 53 [Source:HGNC Symbol;Acc:30003]

Location

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 2158 variant alleles and maps to 299 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367393.3	C1orf53-001	588	145aa	ENSP00000356363.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44290	Q5VUE5	NM_001024594.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000436652.1	C1orf53-002	394	82aa	ENSP00000396800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000542800.1	C1orf53-003	341	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 588 bps, Translation length: 145 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VUE5

CCDS

This transcript is a member of the Human CCDS set: CCDS44290

Version

ENST00000367393.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000086555 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.