Transcript: ENST00000366847.4 FGFR1OP-001

Description

FGFR1 oncogene partner [Source:HGNC Symbol;Acc:17012]

Gene Synonyms

FOP

Location

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 23932 variant alleles and maps to 919 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366847.4	FGFR1OP-001	14166	399aa	ENSP00000355812.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5296	O95684	NM_007045.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000349556.4	FGFR1OP-002	1484	379aa	ENSP00000230248.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5297	O95684	NM_194429.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000476078.1	FGFR1OP-004	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496181.1	FGFR1OP-005	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494781.1	FGFR1OP-003	460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488525.1	FGFR1OP-006	349	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 14,166 bps, Translation length: 399 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95684

CCDS

This transcript is a member of the Human CCDS set: CCDS5296

Version

ENST00000366847.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000043099 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.