Transcript: ENST00000361771.3 WDTC1-001

Description

WD and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:29175]

Gene Synonyms

ADP, DCAF9, KIAA1037

Location

About this transcript

This transcript has 16 exons, is annotated with 35 domains and features, is associated with 30662 variant alleles and maps to 779 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361771.3	WDTC1-001	4275	676aa	ENSP00000355317.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS296	H0YEI6 Q8N5D0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000319394.3	WDTC1-201	4805	677aa	ENSP00000317971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60044	H0YEI6 Q8N5D0	NM_015023.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447062.2	WDTC1-003	3115	615aa	ENSP00000434578.1	Nonsense mediated decay		Q8N5D0	-	-
ENST00000472249.2	WDTC1-004	628	125aa	ENSP00000435903.1	Nonsense mediated decay		H0YEI6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491239.2	WDTC1-002	5149	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 4,275 bps, Translation length: 676 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N5D0

CCDS

This transcript is a member of the Human CCDS set: CCDS296

Version

ENST00000361771.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000012341 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.