Transcript: ENST00000360876.4 EIF3B-002

Description

eukaryotic translation initiation factor 3, subunit B [Source:HGNC Symbol;Acc:3280]

Gene Synonyms

EIF3-ETA, EIF3-P110, EIF3-P116, EIF3S9, PRT1, eIF3b

Location

Chromosome 7: 2,394,501-2,420,378 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 17 domains and features, is associated with 16701 variant alleles and maps to 879 oligo probes.

Gene

This transcript is a product of gene ENSG00000106263.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360876.4	EIF3B-002	3055	814aa	ENSP00000354125.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5332	C9JQN7 P55884 Q86UM1	NM_001037283.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000397011.2	EIF3B-001	2966	814aa	ENSP00000380206.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5332	C9JQN7 P55884 Q86UM1	NM_003751.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000431643.1	EIF3B-008	1074	153aa	ENSP00000408062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQN7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413917.1	EIF3B-003	962	302aa	ENSP00000407785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475415.1	EIF3B-005	3745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465670.1	EIF3B-007	2766	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468611.1	EIF3B-006	1868	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466199.1	EIF3B-012	734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494658.1	EIF3B-013	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463026.1	EIF3B-010	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468250.1	EIF3B-011	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463229.2	EIF3B-009	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,055 bps, Translation length: 814 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55884

CCDS

This transcript is a member of the Human CCDS set: CCDS5332

Version

ENST00000360876.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207006 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000360876.4 EIF3B-002

Summary