Transcript: ENST00000358008.3 AIMP1-002

Description

aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:10648]

Gene Synonyms

EMAP-2, EMAP2, EMAPII, HLD3, SCYE1, p43

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 14002 variant alleles and maps to 603 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394701.4	AIMP1-001	2586	336aa	ENSP00000378191.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47121	D6R937 Q12904	NM_001142416.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000442366.1	AIMP1-201	2519	312aa	ENSP00000405248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3674	D6R937 Q12904	NM_001142415.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000358008.3	AIMP1-002	2412	312aa	ENSP00000350699.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3674	D6R937 Q12904	NM_004757.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510207.1	AIMP1-004	568	150aa	ENSP00000423681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R937	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,412 bps, Translation length: 312 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12904

CCDS

This transcript is a member of the Human CCDS set: CCDS3674

Version

ENST00000358008.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253961 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.