Transcript: ENST00000356443.4 MYOM1-001

Description

myomesin 1 [Source:HGNC Symbol;Acc:7613]

Gene Synonyms

SKELEMIN

Location

Chromosome 18: 3,066,805-3,220,106 reverse strand.

About this transcript

This transcript has 38 exons, is annotated with 68 domains and features, is associated with 65484 variant alleles and maps to 1015 oligo probes.

Gene

This transcript is a product of gene ENSG00000101605.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356443.4	MYOM1-001	5847	1685aa	ENSP00000348821.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45824	P52179	NM_019856.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000400569.3	MYOM1-201	5847	1685aa	ENSP00000383413.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MX12	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000261606.7	MYOM1-003	5154	1589aa	ENSP00000261606.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45823	P52179	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000581075.1	MYOM1-004	684	121aa	ENSP00000462039.1	Nonsense mediated decay		J3KRK2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582016.1	MYOM1-005	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581804.1	MYOM1-006	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577294.1	MYOM1-002	754	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 38, Coding exons: 37, Transcript length: 5,847 bps, Translation length: 1,685 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52179

CCDS

This transcript is a member of the Human CCDS set: CCDS45824

Version

ENST00000356443.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000441037 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000356443.4 MYOM1-001

Summary