Transcript: ENST00000355502.3 PDE4C-001

Description

phosphodiesterase 4C, cAMP-specific [Source:HGNC Symbol;Acc:8782]

Gene Synonyms

DPDE1

Location

Chromosome 19: 18,318,771-18,366,229 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 16 domains and features, is associated with 22455 variant alleles and maps to 1057 oligo probes.

Gene

This transcript is a product of gene ENSG00000105650.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355502.3	PDE4C-001	5979	712aa	ENSP00000347689.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12373	B7Z2S3 M0R1P5 O76105 Q08493 Q32MM7 Q9P1U3 Q9UPJ5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000594617.3	PDE4C-002	4655	712aa	ENSP00000469696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12373	B7Z2S3 M0R1P5 O76105 Q08493 Q32MM7 Q9P1U3 Q9UPJ5	NM_000923.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000594465.3	PDE4C-003	2988	712aa	ENSP00000470210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12373	B7Z2S3 M0R1P5 O76105 Q08493 Q32MM7 Q9P1U3 Q9UPJ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447275.3	PDE4C-005	2542	606aa	ENSP00000402091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46016	Q08493 Q32MM7 Q9P1U3 Q9UPJ5	NM_001098819.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000262805.12	PDE4C-004	2472	680aa	ENSP00000262805.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42523	Q08493 Q32MM7 Q9P1U3 Q9UPJ5	NM_001098818.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000539010.1	PDE4C-201	1699	481aa	ENSP00000439470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q32MM7 Q9P1U3 Q9UPJ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000597297.1	PDE4C-007	1559	482aa	ENSP00000476923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43850 Q9P1U3 Q9UPJ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000598111.2	PDE4C-008	1284	427aa	ENSP00000474591.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O76104 Q9P1U3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000610023.1	PDE4C-016	583	82aa	ENSP00000476961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599754.1	PDE4C-010	528	93aa	ENSP00000472034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1P5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599188.1	PDE4C-009	2101	231aa	ENSP00000473713.2	Nonsense mediated decay		B7Z6T1	-	-
ENST00000593594.1	PDE4C-012	481	89aa	ENSP00000474849.3	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000595343.1	PDE4C-013	420	11aa	ENSP00000473937.3	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000596647.1	PDE4C-015	619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000597360.1	PDE4C-006	3511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600667.2	PDE4C-014	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000597573.1	PDE4C-011	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 15, Transcript length: 5,979 bps, Translation length: 712 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08493

CCDS

This transcript is a member of the Human CCDS set: CCDS12373

Version

ENST00000355502.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000466295 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000355502.3 PDE4C-001

Summary