Transcript: ENST00000355285.5 APCDD1-001

Description

adenomatosis polyposis coli down-regulated 1 [Source:HGNC Symbol;Acc:15718]

Gene Synonyms

B7323, DRAPC1, HHS, HTS

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 16331 variant alleles and maps to 362 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355285.5	APCDD1-001	3809	514aa	ENSP00000347433.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11849	Q8J025	NM_153000.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000584596.2	APCDD1-006	2218	227aa	ENSP00000476491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578882.1	APCDD1-004	559	184aa	ENSP00000463104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTQ6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000423585.2	APCDD1-002	833	61aa	ENSP00000404930.2	Nonsense mediated decay		-	-	-
ENST00000579685.1	APCDD1-005	744	94aa	ENSP00000464649.1	Nonsense mediated decay		J3QSE3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582723.1	APCDD1-003	730	22aa	ENSP00000463110.1	Nonsense mediated decay		J3KTR1	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,809 bps, Translation length: 514 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8J025

CCDS

This transcript is a member of the Human CCDS set: CCDS11849

Version

ENST00000355285.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254529 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.