Transcript: ENST00000354193.4 SVIP-001

Description

small VCP/p97-interacting protein [Source:HGNC Symbol;Acc:25238]

Gene Synonyms

DKFZp313A2432

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 5162 variant alleles and maps to 457 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354193.4	SVIP-001	4541	77aa	ENSP00000346130.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41627	Q8NHG7	NM_148893.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000533774.1	SVIP-003	829	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525670.1	SVIP-005	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530199.1	SVIP-004	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529848.1	SVIP-002	263	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,541 bps, Translation length: 77 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NHG7

CCDS

This transcript is a member of the Human CCDS set: CCDS41627

Version

ENST00000354193.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387725 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.