Transcript: ENST00000349995.5 COG3-001

Description

component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:18619]

Gene Synonyms

SEC34

Location

About this transcript

This transcript has 23 exons, is annotated with 5 domains and features, is associated with 30263 variant alleles and maps to 794 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349995.5	COG3-001	4498	828aa	ENSP00000258654.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9398	Q96JB2	NM_031431.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465942.1	COG3-003	928	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486940.1	COG3-004	663	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476702.1	COG3-002	255	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,498 bps, Translation length: 828 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JB2

CCDS

This transcript is a member of the Human CCDS set: CCDS9398

Version

ENST00000349995.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044777 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.