Transcript: ENST00000342192.4 UBE2L3-001

Description

ubiquitin-conjugating enzyme E2L 3 [Source:HGNC Symbol;Acc:12488]

Gene Synonyms

E2-F1, L-UBC, UBCE7, UBCH7, UbcM4

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 26147 variant alleles and maps to 718 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000458578.2	UBE2L3-201	1225	212aa	ENSP00000400906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58795	P68036	NM_001256355.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000342192.4	UBE2L3-001	3028	154aa	ENSP00000344259.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13790	P68036	NM_003347.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545681.1	UBE2L3-202	1057	122aa	ENSP00000445931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58796	P68036	NM_001256356.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000496722.1	UBE2L3-002	3451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,028 bps, Translation length: 154 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P68036

CCDS

This transcript is a member of the Human CCDS set: CCDS13790

Version

ENST00000342192.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320219 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.