Transcript: ENST00000342032.3 PPP1R17-001

Description

protein phosphatase 1, regulatory subunit 17 [Source:HGNC Symbol;Acc:16973]

Gene Synonyms

C7orf16, GSBS

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 10141 variant alleles and maps to 346 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342032.3	PPP1R17-001	2268	155aa	ENSP00000340125.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5436	O96001	NM_006658.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409146.3	PPP1R17-002	569	104aa	ENSP00000386459.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47570	O96001	NM_001145123.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000498609.1	PPP1R17-003	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,268 bps, Translation length: 155 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O96001

CCDS

This transcript is a member of the Human CCDS set: CCDS5436

Version

ENST00000342032.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250498 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.