Transcript: ENST00000340722.7 TCL1B-001

Description

T-cell leukemia/lymphoma 1B [Source:HGNC Symbol;Acc:11649]

Gene Synonyms

SYN-1, TCL1, TML1

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 3195 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340722.7	TCL1B-001	1166	128aa	ENSP00000343223.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32151	O95988	NM_004918.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000464815.1	TCL1B-002	1724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556665.1	TCL1B-003	382	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,166 bps, Translation length: 128 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95988

CCDS

This transcript is a member of the Human CCDS set: CCDS32151

Version

ENST00000340722.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000315123 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.