Transcript: ENST00000340524.5 UTS2B-001

Description

urotensin 2B [Source:HGNC Symbol;Acc:30894]

Gene Synonyms

U2B, URP, UTS2D

Location

Chromosome 3: 190,984,957-191,048,325 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 27833 variant alleles and maps to 413 oligo probes.

Gene

This transcript is a product of gene ENSG00000188958.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340524.5	UTS2B-001	2395	119aa	ENSP00000340526.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3300	C9JU87 Q765I0	NM_198152.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432514.1	UTS2B-002	1005	38aa	ENSP00000401028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427544.2	UTS2B-005	676	119aa	ENSP00000398761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3300	C9JU87 Q765I0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440476.1	UTS2B-006	839	81aa	ENSP00000398540.1	Nonsense mediated decay		C9JU87 F2Z3I1	-	-
ENST00000446788.1	UTS2B-009	836	132aa	ENSP00000415628.1	Nonsense mediated decay		C9JU87 F8WCV4	-	-
ENST00000425357.1	UTS2B-008	701	81aa	ENSP00000404406.1	Nonsense mediated decay		C9JU87 F2Z3I1	-	-
ENST00000490825.1	UTS2B-003	712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463450.1	UTS2B-007	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464814.1	UTS2B-004	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 5, Transcript length: 2,395 bps, Translation length: 119 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q765I0

CCDS

This transcript is a member of the Human CCDS set: CCDS3300

Version

ENST00000340524.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000343353 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340524.5 UTS2B-001

Summary