Transcript: ENST00000339468.3 YPEL1-001

Description

yippee-like 1 (Drosophila) [Source:HGNC Symbol;Acc:12845]

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 17588 variant alleles and maps to 518 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000339468.3	YPEL1-001	4329	119aa	ENSP00000342832.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13794	O60688	NM_013313.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000403503.1	YPEL1-003	466	44aa	ENSP00000386014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCX2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000477675.1	YPEL1-002	1319	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 4,329 bps, Translation length: 119 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60688

CCDS

This transcript is a member of the Human CCDS set: CCDS13794

Version

ENST00000339468.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320245 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.