Transcript: ENST00000337851.4 SGCD-002

Description

sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) [Source:HGNC Symbol;Acc:10807]

Gene Synonyms

35DAG, CMD1L, DAGD, LGMD2F, SG-delta, SGCDP, SGD

Location

About this transcript

This transcript has 9 exons, is annotated with 5 domains and features, is associated with 191990 variant alleles and maps to 505 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000435422.3	SGCD-001	9755	289aa	ENSP00000403003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47327	Q92629	NM_001128209.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337851.4	SGCD-002	1606	290aa	ENSP00000338343.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47325	Q92629	NM_000337.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447401.1	SGCD-201	1571	256aa	ENSP00000408324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47326	Q92629	NM_172244.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517913.1	SGCD-003	1412	256aa	ENSP00000429378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47326	Q92629	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524347.1	SGCD-004	739	82aa	ENSP00000430794.1	Nonsense mediated decay		E5RI34	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,606 bps, Translation length: 290 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92629

CCDS

This transcript is a member of the Human CCDS set: CCDS47325

Version

ENST00000337851.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000373470 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.