Transcript: ENST00000337851.4 SGCD-002

Description

sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) [Source:HGNC Symbol;Acc:10807]

Gene Synonyms

35DAG, CMD1L, DAGD, LGMD2F, SG-delta, SGCDP, SGD

Location

Chromosome 5: 155,753,767-156,186,615 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 5 domains and features, is associated with 191990 variant alleles and maps to 505 oligo probes.

Gene

This transcript is a product of gene ENSG00000170624.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337851.4	SGCD-002	1606	290aa	ENSP00000338343.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47325	Q92629	NM_000337.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435422.3	SGCD-001	9755	289aa	ENSP00000403003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47327	Q92629	NM_001128209.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447401.1	SGCD-201	1571	256aa	ENSP00000408324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47326	Q92629	NM_172244.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517913.1	SGCD-003	1412	256aa	ENSP00000429378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47326	Q92629	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524347.1	SGCD-004	739	82aa	ENSP00000430794.1	Nonsense mediated decay		E5RI34	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,606 bps, Translation length: 290 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92629

CCDS

This transcript is a member of the Human CCDS set: CCDS47325

Version

ENST00000337851.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000373470 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000337851.4 SGCD-002

Summary