Transcript: ENST00000334785.7 NEXN-001

Description

nexilin (F actin binding protein) [Source:HGNC Symbol;Acc:29557]

Gene Synonyms

CMH20, NELIN, nexilin

Location

Chromosome 1: 78,354,313-78,408,909 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 24 domains and features, is associated with 23008 variant alleles and maps to 607 oligo probes.

Gene

This transcript is a product of gene ENSG00000162614.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330010.8	NEXN-202	3195	611aa	ENSP00000327363.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53335	B4DDI0 E7ETM8 Q0ZGT2	NM_001172309.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342754.5	NEXN-005	2712	576aa	ENSP00000343928.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000334785.7	NEXN-001	2607	675aa	ENSP00000333938.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41351	B4DDI0 Q0ZGT2	NM_144573.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457030.1	NEXN-203	2286	662aa	ENSP00000388048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUA0 Q0ZGT2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440324.1	NEXN-003	1456	435aa	ENSP00000411902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000401035.3	NEXN-002	1263	321aa	ENSP00000383814.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETM8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000294624.8	NEXN-201	842	159aa	ENSP00000294624.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480732.2	NEXN-004	1972	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464998.1	NEXN-007	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470735.1	NEXN-006	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,607 bps, Translation length: 675 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q0ZGT2

CCDS

This transcript is a member of the Human CCDS set: CCDS41351

Version

ENST00000334785.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000097549 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000334785.7 NEXN-001

Summary