Transcript: ENST00000333407.6 FAM83F-002

Description

family with sequence similarity 83, member F [Source:HGNC Symbol;Acc:25148]

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 21450 variant alleles and maps to 679 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333407.6	FAM83F-002	15561	500aa	ENSP00000330432.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14000	Q8NEG4	NM_138435.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000473717.1	FAM83F-001	1917	332aa	ENSP00000476600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000488874.1	FAM83F-003	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 15,561 bps, Translation length: 500 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEG4

CCDS

This transcript is a member of the Human CCDS set: CCDS14000

Version

ENST00000333407.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319624 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.