Transcript: ENST00000330374.6 VMA21-001

Description

VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:22082]

Gene Synonyms

MEAX, XMEA

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 3891 variant alleles and maps to 358 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330374.6	VMA21-001	4717	101aa	ENSP00000333255.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35430	Q3ZAQ7	NM_001017980.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370361.1	VMA21-003	693	156aa	ENSP00000359386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3ZAQ7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000477649.1	VMA21-002	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 4,717 bps, Translation length: 101 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3ZAQ7

CCDS

This transcript is a member of the Human CCDS set: CCDS35430

Version

ENST00000330374.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060876 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.