Transcript: ENST00000325542.5 CEP57-001

Description

centrosomal protein 57kDa [Source:HGNC Symbol;Acc:30794]

Gene Synonyms

KIAA0092, MVA2, PIG8, TSP57, Translokin

Location

Chromosome 11: 95,523,625-95,565,857 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 19939 variant alleles and maps to 646 oligo probes.

Gene

This transcript is a product of gene ENSG00000166037.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325542.5	CEP57-001	3178	500aa	ENSP00000317902.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8304	F5GYW0 F5H1B0 Q86XR8	NM_014679.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000325486.5	CEP57-201	3080	474aa	ENSP00000317487.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58166	F5H1B0 Q86XR8	NM_001243777.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541150.1	CEP57-202	2910	491aa	ENSP00000443436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58167	F5GYW0 F5H0C6 F5H1B0 Q86XR8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538658.1	CEP57-004	2084	270aa	ENSP00000445706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1B0 Q86XR8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537677.1	CEP57-002	1647	473aa	ENSP00000441392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYW0 F5H1B0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541365.1	CEP57-011	870	205aa	ENSP00000445821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1B0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544522.1	CEP57-009	851	198aa	ENSP00000438065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0C6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535224.1	CEP57-013	760	254aa	ENSP00000440256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000537093.1	CEP57-012	404	134aa	ENSP00000444749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YGT4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000540830.1	CEP57-007	1936	71aa	ENSP00000440996.1	Nonsense mediated decay		F5GXS6	-	-
ENST00000539855.1	CEP57-006	1739	82aa	ENSP00000437422.1	Nonsense mediated decay		F5H6R3	-	-
ENST00000538095.1	CEP57-008	590	52aa	ENSP00000443866.1	Nonsense mediated decay		F5GZ93	-	-
ENST00000535497.1	CEP57-010	446	41aa	ENSP00000442481.1	Nonsense mediated decay		F5H7J4	-	-
ENST00000536587.1	CEP57-015	447	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538158.1	CEP57-005	2632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541768.1	CEP57-014	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,178 bps, Translation length: 500 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86XR8

CCDS

This transcript is a member of the Human CCDS set: CCDS8304

Version

ENST00000325542.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395983 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000325542.5 CEP57-001

Summary