Transcript: ENST00000325234.5 PLCB3-004

Description

phospholipase C, beta 3 (phosphatidylinositol-specific) [Source:HGNC Symbol;Acc:9056]

Location

About this transcript

This transcript has 29 exons, is annotated with 39 domains and features, is associated with 8647 variant alleles and maps to 726 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000540288.1	PLCB3-002	4469	1234aa	ENSP00000443631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8064	Q01970	NM_000932.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000279230.6	PLCB3-001	4197	1234aa	ENSP00000279230.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8064	Q01970	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000325234.5	PLCB3-004	3946	1167aa	ENSP00000324660.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53654	Q01970	NM_001184883.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536243.1	PLCB3-003	471	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 3,946 bps, Translation length: 1,167 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01970

CCDS

This transcript is a member of the Human CCDS set: CCDS53654

Version

ENST00000325234.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396406 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.