Transcript: ENST00000325017.3 NKX2-6-001

Description

NK2 homeobox 6 [Source:HGNC Symbol;Acc:32940]

Gene Synonyms

CSX2, NKX2F, NKX4-2

Location

About this transcript

This transcript has 2 exons, is annotated with 13 domains and features, is associated with 2420 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325017.3	NKX2-6-001	906	301aa	ENSP00000320089.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NCS4 C9JML6	NM_001136271.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000418222.1	NKX2-6-201	717	219aa	ENSP00000402231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JML6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 906 bps, Translation length: 301 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NCS4

Version

ENST00000325017.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000376057 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.