Transcript: ENST00000316084.6 RPS4X-001

Description

ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424]

Gene Synonyms

CCG2, DXS306, FLJ40595, RPS4, S4, SCAR, SCR10

Location

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 1896 variant alleles and maps to 468 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316084.6	RPS4X-001	1526	263aa	ENSP00000362744.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14418	B2R491 P62701 Q96IR1	NM_001007.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373626.3	RPS4X-002	594	122aa	ENSP00000362729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NH36	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000486733.1	RPS4X-003	1820	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470671.1	RPS4X-004	610	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492695.1	RPS4X-005	355	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,526 bps, Translation length: 263 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62701

CCDS

This transcript is a member of the Human CCDS set: CCDS14418

Version

ENST00000316084.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000057188 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.