Transcript: ENST00000315962.4 TRIM55-001

Description

tripartite motif containing 55 [Source:HGNC Symbol;Acc:14215]

Gene Synonyms

MURF-2, MURF2, RNF29, muRF2

Location

Chromosome 8: 67,039,131-67,087,720 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 20761 variant alleles and maps to 513 oligo probes.

Gene

This transcript is a product of gene ENSG00000147573.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315962.4	TRIM55-001	2912	548aa	ENSP00000323913.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6184	Q9BYV6	NM_184085.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000353317.5	TRIM55-002	2624	452aa	ENSP00000297348.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6185	Q9BYV6	NM_184086.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000276573.7	TRIM55-004	1960	540aa	ENSP00000276573.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6187	Q9BYV6	NM_033058.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000350034.4	TRIM55-003	1177	241aa	ENSP00000332302.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6186	Q9BYV6	NM_184087.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517647.1	TRIM55-006	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,912 bps, Translation length: 548 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYV6

CCDS

This transcript is a member of the Human CCDS set: CCDS6184

Version

ENST00000315962.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378921 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000315962.4 TRIM55-001

Summary