Transcript: ENST00000315087.7 ST8SIA5-001

Description

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:HGNC Symbol;Acc:17827]

Gene Synonyms

SIAT8E, ST8SiaV

Location

Chromosome 18: 44,259,081-44,337,132 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 34237 variant alleles and maps to 462 oligo probes.

Gene

This transcript is a product of gene ENSG00000101638.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315087.7	ST8SIA5-001	2716	376aa	ENSP00000321343.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11930	B3KSU2 O15466	NM_013305.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538168.1	ST8SIA5-004	1914	412aa	ENSP00000445492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSU2 B7Z1K9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536490.1	ST8SIA5-002	1499	345aa	ENSP00000443683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSU2 F5H8D1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590488.1	ST8SIA5-007	582	40aa	ENSP00000466787.1	Nonsense mediated decay		K7EN49	-	-
ENST00000591375.1	ST8SIA5-006	364	54aa	ENSP00000468112.1	Nonsense mediated decay		K7ER54	-	-
ENST00000590497.1	ST8SIA5-005	2094	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588155.1	ST8SIA5-003	1440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589088.1	ST8SIA5-009	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587428.1	ST8SIA5-008	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,716 bps, Translation length: 376 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15466

CCDS

This transcript is a member of the Human CCDS set: CCDS11930

Version

ENST00000315087.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255892 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000315087.7 ST8SIA5-001

Summary