Transcript: ENST00000314797.6 COPG1-001

Description

coatomer protein complex, subunit gamma 1 [Source:HGNC Symbol;Acc:2236]

Gene Synonyms

COPG

Location

Chromosome 3: 128,968,449-128,996,614 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 16 domains and features, is associated with 12347 variant alleles and maps to 771 oligo probes.

Gene

This transcript is a product of gene ENSG00000181789.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314797.6	COPG1-001	3076	874aa	ENSP00000325002.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33851	Q8WUI6 Q9Y678	NM_016128.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000509889.1	COPG1-008	599	188aa	ENSP00000422478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514478.1	COPG1-006	734	76aa	ENSP00000420916.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504350.1	COPG1-005	672	49aa	ENSP00000426457.1	Nonsense mediated decay		D6RG17	-	-
ENST00000515725.1	COPG1-002	3231	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513965.1	COPG1-004	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504547.1	COPG1-015	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513410.1	COPG1-009	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509208.1	COPG1-014	472	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512034.1	COPG1-013	398	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,076 bps, Translation length: 874 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y678

CCDS

This transcript is a member of the Human CCDS set: CCDS33851

Version

ENST00000314797.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000355456 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000314797.6 COPG1-001

Summary