Transcript: ENST00000313050.7 SEC16A-202

Description

SEC16 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:29006]

Gene Synonyms

KIAA0310, RP11-413M3.10, SEC16, SEC16L, p250

Location

Chromosome 9: 139,334,549-139,372,141 reverse strand.

About this transcript

This transcript has 30 exons, is annotated with 26 domains and features, is associated with 19666 variant alleles and maps to 1009 oligo probes.

Gene

This transcript is a product of gene ENSG00000148396.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313050.7	SEC16A-202	8806	2357aa	ENSP00000325827.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55351	A0PJ75 G1UI25 J3KNL6	NM_014866.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371706.3	SEC16A-001	8093	2134aa	ENSP00000360771.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O15027	NM_001276418.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000290037.6	SEC16A-201	6556	2159aa	ENSP00000290037.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DW51 O15027	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000431893.2	SEC16A-204	6541	2154aa	ENSP00000387583.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O15027	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000453963.1	SEC16A-005	4834	1059aa	ENSP00000403525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DW51	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000277537.6	SEC16A-004	3910	751aa	ENSP00000277537.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0PJ75 O15027	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000398335.1	SEC16A-203	3517	140aa	ENSP00000381379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZP13	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000313084.5	SEC16A-002	3073	385aa	ENSP00000317437.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N9G1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000467838.1	SEC16A-006	1983	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472305.1	SEC16A-007	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 8,806 bps, Translation length: 2,357 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55351

Version

ENST00000313050.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000313050.7 SEC16A-202

Summary