Transcript: ENST00000310418.4 CLTB-001

Description

clathrin, light chain B [Source:HGNC Symbol;Acc:2091]

Gene Synonyms

LCB, Lcb

Location

Chromosome 5: 175,819,456-175,843,570 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 10873 variant alleles and maps to 608 oligo probes.

Gene

This transcript is a product of gene ENSG00000175416.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310418.4	CLTB-001	1215	229aa	ENSP00000309415.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4403	P09497	NM_007097.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000345807.2	CLTB-002	1161	211aa	ENSP00000310812.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4402	P09497	NM_001834.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000502877.1	CLTB-005	552	125aa	ENSP00000427229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJD1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508425.1	CLTB-006	527	81aa	ENSP00000424739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9Q6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510734.1	CLTB-003	1489	134aa	ENSP00000422978.1	Nonsense mediated decay		B4DTF9	-	-
ENST00000509319.1	CLTB-004	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507821.1	CLTB-007	417	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,215 bps, Translation length: 229 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09497

CCDS

This transcript is a member of the Human CCDS set: CCDS4403

Version

ENST00000310418.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253153 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000310418.4 CLTB-001

Summary