Transcript: ENST00000307503.3 AGXT-001

Description

alanine-glyoxylate aminotransferase [Source:HGNC Symbol;Acc:341]

Gene Synonyms

AGT, AGT1, AGXT1, PH1, SPAT, SPT, TLH6

Location

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 6494 variant alleles and maps to 486 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307503.3	AGXT-001	1865	392aa	ENSP00000302620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2543	P21549	NM_000030.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000470255.1	AGXT-002	2638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472436.1	AGXT-003	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476698.1	AGXT-004	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,865 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21549

CCDS

This transcript is a member of the Human CCDS set: CCDS2543

Version

ENST00000307503.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257186 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.