Transcript: ENST00000307259.8 PPAP2A-002

Description

phosphatidic acid phosphatase type 2A [Source:HGNC Symbol;Acc:9228]

Gene Synonyms

LLP1a, LPP1, PAP-2a, PAP2

Location

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 48231 variant alleles and maps to 427 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264775.5	PPAP2A-001	1550	285aa	ENSP00000264775.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34160	O14494	NM_176895.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000307259.8	PPAP2A-002	1597	284aa	ENSP00000302229.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34159	O14494	NM_003711.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000509667.1	PPAP2A-005	971	110aa	ENSP00000425052.1	Nonsense mediated decay		D6REC3	-	-
ENST00000515132.1	PPAP2A-004	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502907.1	PPAP2A-003	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520263.1	PPAP2A-006	451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,597 bps, Translation length: 284 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14494

CCDS

This transcript is a member of the Human CCDS set: CCDS34159

Version

ENST00000307259.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000368073 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.