Transcript: ENST00000306065.4 ANKRD27-001

Description

ankyrin repeat domain 27 (VPS9 domain) [Source:HGNC Symbol;Acc:25310]

Gene Synonyms

DKFZp434L0718, FLJ00040, VARP

Location

Chromosome 19: 33,087,913-33,166,105 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 40 domains and features, is associated with 38024 variant alleles and maps to 783 oligo probes.

Gene

This transcript is a product of gene ENSG00000105186.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306065.4	ANKRD27-001	4450	1050aa	ENSP00000304292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32986	K7EIH4 K7EIN0 K7EPM2 Q96NW4	NM_032139.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000587352.1	ANKRD27-002	3301	389aa	ENSP00000466138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIN0 K7ELM1 K7EPM2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590519.2	ANKRD27-010	1067	75aa	ENSP00000464819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586463.1	ANKRD27-003	743	30aa	ENSP00000467447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPM2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000591100.2	ANKRD27-009	628	174aa	ENSP00000464751.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIH4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586693.3	ANKRD27-011	557	150aa	ENSP00000476897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588700.1	ANKRD27-004	773	82aa	ENSP00000466905.1	Nonsense mediated decay		K7ENE0	-	-
ENST00000593232.1	ANKRD27-008	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587667.1	ANKRD27-006	439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 4,450 bps, Translation length: 1,050 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96NW4

CCDS

This transcript is a member of the Human CCDS set: CCDS32986

Version

ENST00000306065.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000450329 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000306065.4 ANKRD27-001

Summary