Transcript: ENST00000305531.3 FRMPD2-005

Description

FERM and PDZ domain containing 2 [Source:HGNC Symbol;Acc:28572]

Gene Synonyms

MGC35285, PDZD5C, PDZK4, PDZK5C

Location

Chromosome 10: 49,364,602-49,459,800 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 39 domains and features, is associated with 41224 variant alleles and maps to 1181 oligo probes.

Gene

This transcript is a product of gene ENSG00000170324.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374201.3	FRMPD2-001	4997	1309aa	ENSP00000363317.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31195	Q68DX3	NM_001042512.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000407470.4	FRMPD2-201	4955	1277aa	ENSP00000384339.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCT2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000305531.3	FRMPD2-005	4665	1284aa	ENSP00000307079.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCT2 Q68DX3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000474573.1	FRMPD2-007	1959	261aa	ENSP00000422446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DX3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000463706.1	FRMPD2-006	1845	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494505.1	FRMPD2-009	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486151.1	FRMPD2-004	3466	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491130.1	FRMPD2-008	1684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492045.1	FRMPD2-003	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468556.1	FRMPD2-002	619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505547.1	FRMPD2-012	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477710.1	FRMPD2-010	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 4,665 bps, Translation length: 1,284 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q68DX3

Version

ENST00000305531.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000277029 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000305531.3 FRMPD2-005

Summary