Transcript: ENST00000304979.3 PPIH-001

Description

peptidylprolyl isomerase H (cyclophilin H) [Source:HGNC Symbol;Acc:14651]

Gene Synonyms

CYP-20, CYP20, CYPH, MGC5016, SnuCyp-20, USA-CYP

Location

Chromosome 1: 43,124,096-43,142,429 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 13 domains and features, is associated with 7004 variant alleles and maps to 391 oligo probes.

Gene

This transcript is a product of gene ENSG00000171960.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304979.3	PPIH-001	752	177aa	ENSP00000306614.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS469	C9JQD4 H0YEL5 O43447 Q6FH36	NM_006347.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000455203.2	PPIH-201	1311	134aa	ENSP00000416361.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NNE7 H0YEL5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440068.1	PPIH-002	669	144aa	ENSP00000402836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQD4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000372550.1	PPIH-004	665	134aa	ENSP00000361630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NNE7 H0YEL5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000436387.1	PPIH-005	416	68aa	ENSP00000405493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000372549.1	PPIH-003	327	57aa	ENSP00000361629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NM32	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000461351.1	PPIH-006	527	96aa	ENSP00000436091.1	Nonsense mediated decay		H0YEL5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 752 bps, Translation length: 177 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43447

CCDS

This transcript is a member of the Human CCDS set: CCDS469

Version

ENST00000304979.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000019778 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000304979.3 PPIH-001

Summary