Transcript: ENST00000300413.5 SNRPD1-001

Description

small nuclear ribonucleoprotein D1 polypeptide 16kDa [Source:HGNC Symbol;Acc:11158]

Gene Synonyms

HsT2456, SMD1, SNRPD, Sm-D1

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 8733 variant alleles and maps to 383 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300413.5	SNRPD1-001	1841	119aa	ENSP00000300413.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32801	J3QLI9 P62314	NM_006938.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000582475.1	SNRPD1-002	723	75aa	ENSP00000463568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLI9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000579618.1	SNRPD1-003	320	44aa	ENSP00000463676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLR7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,841 bps, Translation length: 119 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62314

CCDS

This transcript is a member of the Human CCDS set: CCDS32801

Version

ENST00000300413.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000444020 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.