Transcript: ENST00000299638.3 POLR2M-001

Description

polymerase (RNA) II (DNA directed) polypeptide M [Source:HGNC Symbol;Acc:14862]

Gene Synonyms

GCOM1, GRINL1A, Gcom2, Gdown, Gdown1, MYZAP, MYZAP-POLR2M, gcom

Location

Chromosome 15: 57,998,827-58,009,755 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 5805 variant alleles and maps to 672 oligo probes.

Gene

This transcript is a product of gene ENSG00000255529.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299638.3	POLR2M-001	4199	368aa	ENSP00000299638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32252	E9PP13 P0CAP2	NM_015532.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380557.4	POLR2M-002	3629	211aa	ENSP00000369930.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42045	E9PP13 P0CAP2	NM_001018102.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380563.2	POLR2M-201	3487	363aa	ENSP00000369937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PP13 P0CAP2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000482852.1	POLR2M-006	2896	363aa	ENSP00000432615.1	Nonsense mediated decay		E9PP13 P0CAP2	-	-
ENST00000494490.1	POLR2M-004	1648	38aa	ENSP00000433988.1	Nonsense mediated decay		E9PP13	-	-
ENST00000464277.1	POLR2M-005	910	38aa	ENSP00000437015.1	Nonsense mediated decay		E9PP13	-	-
ENST00000464308.1	POLR2M-003	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567643.1	POLR2M-007	591	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562260.1	POLR2M-008	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,199 bps, Translation length: 368 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0CAP2

CCDS

This transcript is a member of the Human CCDS set: CCDS32252

Version

ENST00000299638.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255719 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000299638.3 POLR2M-001

Summary