Transcript: ENST00000296658.3 CMBL-001

Description

carboxymethylenebutenolidase homolog (Pseudomonas) [Source:HGNC Symbol;Acc:25090]

Gene Synonyms

FLJ23617, JS-1

Location

Chromosome 5: 10,279,389-10,308,138 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 12427 variant alleles and maps to 400 oligo probes.

Gene

This transcript is a product of gene ENSG00000164237.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296658.3	CMBL-001	2335	245aa	ENSP00000296658.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3878	Q96DG6	NM_138809.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510532.1	CMBL-006	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503834.1	CMBL-008	442	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506224.1	CMBL-007	218	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506821.1	CMBL-003	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511963.1	CMBL-005	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514202.1	CMBL-004	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,335 bps, Translation length: 245 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96DG6

CCDS

This transcript is a member of the Human CCDS set: CCDS3878

Version

ENST00000296658.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253689 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000296658.3 CMBL-001

Summary