Transcript: ENST00000296464.4 HSPA4L-001

Description

heat shock 70kDa protein 4-like [Source:HGNC Symbol;Acc:17041]

Gene Synonyms

APG-1, APG1, HSPH3, OSP94, Osp94

Location

Chromosome 4: 128,703,295-128,761,888 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 27 domains and features, is associated with 22961 variant alleles and maps to 725 oligo probes.

Gene

This transcript is a product of gene ENSG00000164070.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296464.4	HSPA4L-001	10790	839aa	ENSP00000296464.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3734	O95757	NM_014278.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508776.1	HSPA4L-003	3020	839aa	ENSP00000422482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3734	O95757	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000439123.2	HSPA4L-201	3020	870aa	ENSP00000393926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ES43	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000505726.1	HSPA4L-002	2639	813aa	ENSP00000425645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDE8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508549.1	HSPA4L-004	1822	531aa	ENSP00000427305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJ96	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515262.1	HSPA4L-005	648	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 10,790 bps, Translation length: 839 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95757

CCDS

This transcript is a member of the Human CCDS set: CCDS3734

Version

ENST00000296464.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257096 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000296464.4 HSPA4L-001

Summary