Transcript: ENST00000295797.4 PRKCI-001

Description

protein kinase C, iota [Source:HGNC Symbol;Acc:9404]

Gene Synonyms

DXS1179E, PKCI, nPKC-iota

Location

Chromosome 3: 169,940,153-170,023,769 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 29 domains and features, is associated with 36885 variant alleles and maps to 886 oligo probes.

Gene

This transcript is a product of gene ENSG00000163558.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295797.4	PRKCI-001	4950	596aa	ENSP00000295797.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3212	P41743	NM_002740.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000476635.1	PRKCI-002	3650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485837.1	PRKCI-007	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493761.1	PRKCI-003	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482353.2	PRKCI-005	495	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488541.1	PRKCI-004	332	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483697.2	PRKCI-006	267	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 4,950 bps, Translation length: 596 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41743

CCDS

This transcript is a member of the Human CCDS set: CCDS3212

Version

ENST00000295797.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000316866 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000295797.4 PRKCI-001

Summary