Transcript: ENST00000292672.2 CELF5-001

Description

CUGBP, Elav-like family member 5 [Source:HGNC Symbol;Acc:14058]

Gene Synonyms

BRUNOL-5, BRUNOL5, CELF-5

Location

Chromosome 19: 3,224,701-3,297,074 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 36949 variant alleles and maps to 627 oligo probes.

Gene

This transcript is a product of gene ENSG00000161082.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292672.2	CELF5-001	1854	485aa	ENSP00000292672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12106	Q8N6W0	NM_021938.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541430.2	CELF5-002	4268	409aa	ENSP00000443498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54197	Q8N6W0	NM_001172673.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588350.1	CELF5-005	3115	295aa	ENSP00000468503.1	Nonsense mediated decay		K7ES14	-	-
ENST00000334293.6	CELF5-004	1591	320aa	ENSP00000335182.6	Nonsense mediated decay		B4DFI3 K7ES14	-	-
ENST00000588101.1	CELF5-007	873	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589370.1	CELF5-009	702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586050.1	CELF5-008	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591483.1	CELF5-006	473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,854 bps, Translation length: 485 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N6W0

CCDS

This transcript is a member of the Human CCDS set: CCDS12106

Version

ENST00000292672.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452574 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000292672.2 CELF5-001

Summary