Transcript: ENST00000289382.3 CNOT11-001

Description

CCR4-NOT transcription complex, subunit 11 [Source:HGNC Symbol;Acc:25217]

Gene Synonyms

C2orf29, C40

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 7638 variant alleles and maps to 423 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000289382.3	CNOT11-001	2599	510aa	ENSP00000289382.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2050	B3KNB0 Q9UKZ1	NM_017546.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000420107.1	CNOT11-003	552	127aa	ENSP00000394203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000462489.1	CNOT11-002	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,599 bps, Translation length: 510 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKZ1

CCDS

This transcript is a member of the Human CCDS set: CCDS2050

Version

ENST00000289382.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253181 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.