Transcript: ENST00000287878.4 PRKAG2-001

Description

protein kinase, AMP-activated, gamma 2 non-catalytic subunit [Source:HGNC Symbol;Acc:9386]

Gene Synonyms

AAKG, AAKG2, CMH6, H91620p, WPWS

Location

Chromosome 7: 151,253,197-151,574,210 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 21 domains and features, is associated with 146330 variant alleles and maps to 664 oligo probes.

Gene

This transcript is a product of gene ENSG00000106617.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287878.4	PRKAG2-001	3305	569aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5928	C9JUG1 Q9UGJ0	NM_016203.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000492843.1	PRKAG2-004	2699	445aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUG1 E9PGP6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000433631.2	PRKAG2-201	2645	444aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLM0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000418337.2	PRKAG2-002	2318	328aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47752	C9JUG1 Q9UGJ0	NM_024429.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392801.2	PRKAG2-003	2281	525aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43683	C9JUG1 Q9UGJ0	NM_001040633.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000476632.1	PRKAG2-010	1123	163aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488258.1	PRKAG2-006	1413	229aa	Nonsense mediated decay		F8WDA1	-	-
ENST00000493872.1	PRKAG2-012	573	52aa	Nonsense mediated decay		F8WAY3	-	-
ENST00000478989.1	PRKAG2-015	564	118aa	Nonsense mediated decay		F8WDB5	-	-
ENST00000461529.1	PRKAG2-008	575	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487375.1	PRKAG2-009	562	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474383.1	PRKAG2-007	510	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481434.1	PRKAG2-005	1670	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491938.1	PRKAG2-014	653	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479461.1	PRKAG2-017	570	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483775.1	PRKAG2-013	539	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485183.1	PRKAG2-016	480	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Loading component

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,305 bps, Translation length: 569 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGJ0

CCDS

This transcript is a member of the Human CCDS set: CCDS5928

Version

ENST00000287878.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000348440 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Personal Data

Favourite species

All species

Recent locations

Transcript: ENST00000287878.4 PRKAG2-001

Summary