Transcript: ENST00000282728.5 HHEX-001

Description

hematopoietically expressed homeobox [Source:HGNC Symbol;Acc:4901]

Gene Synonyms

HEX, HMPH, HOX11L-PEN, PRH, PRHX

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 3593 variant alleles and maps to 403 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282728.5	HHEX-001	3490	270aa	ENSP00000282728.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7423	F8VU08 Q03014	NM_002729.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000472590.2	HHEX-002	1786	98aa	ENSP00000450017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VU08	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000492654.2	HHEX-003	985	98aa	ENSP00000447953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VU08	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000551454.1	HHEX-004	1307	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,490 bps, Translation length: 270 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q03014

CCDS

This transcript is a member of the Human CCDS set: CCDS7423

Version

ENST00000282728.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049402 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.