Transcript: ENST00000282007.3 ZC3H13-002

Description

zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:20368]

Gene Synonyms

DKFZp434D1812, KIAA0853

Location

Chromosome 13: 46,536,314-46,626,894 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 37 domains and features, is associated with 37500 variant alleles and maps to 537 oligo probes.

Gene

This transcript is a product of gene ENSG00000123200.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282007.3	ZC3H13-002	6409	1564aa	ENSP00000282007.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9400	Q5T200	NM_015070.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000242848.4	ZC3H13-001	8018	1668aa	ENSP00000242848.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W781 Q5T200	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000378921.2	ZC3H13-201	4794	624aa	ENSP00000368201.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W781	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428921.1	ZC3H13-005	695	115aa	ENSP00000416238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9K0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470308.1	ZC3H13-003	795	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464597.1	ZC3H13-004	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 6,409 bps, Translation length: 1,564 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T200

CCDS

This transcript is a member of the Human CCDS set: CCDS9400

Version

ENST00000282007.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044790 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000282007.3 ZC3H13-002

Summary