Transcript: ENST00000274008.4 SPATA5-001

Description

spermatogenesis associated 5 [Source:HGNC Symbol;Acc:18119]

Gene Synonyms

AFG2, SPAF

Location

About this transcript

This transcript has 16 exons, is annotated with 17 domains and features, is associated with 162589 variant alleles and maps to 711 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274008.4	SPATA5-001	8137	893aa	ENSP00000274008.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3730	Q8NB90	NM_145207.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422835.2	SPATA5-002	2492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 8,137 bps, Translation length: 893 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NB90

CCDS

This transcript is a member of the Human CCDS set: CCDS3730

Version

ENST00000274008.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256714 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.