Transcript: ENST00000272645.4 POLR2D-001

Description

polymerase (RNA) II (DNA directed) polypeptide D [Source:HGNC Symbol;Acc:9191]

Gene Synonyms

HSRBP4, HSRPB4, RBP4, RPB16

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 5576 variant alleles and maps to 491 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272645.4	POLR2D-001	2327	142aa	ENSP00000272645.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2151	E9PB93 O15514 Q53T47 Q587J0	NM_004805.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409955.1	POLR2D-002	1758	110aa	ENSP00000387323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHV4 Q53T47	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409698.1	POLR2D-003	806	104aa	ENSP00000387117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PB93 Q587J0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000487079.1	POLR2D-004	1037	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,327 bps, Translation length: 142 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15514

CCDS

This transcript is a member of the Human CCDS set: CCDS2151

Version

ENST00000272645.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254388 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.