Transcript: ENST00000270502.6 C19orf52-001

Description

chromosome 19 open reading frame 52 [Source:HGNC Symbol;Acc:25152]

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 979 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000270502.6	C19orf52-001	1425	260aa	ENSP00000270502.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12252	Q9BSF4	NM_138358.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588807.1	C19orf52-002	859	27aa	ENSP00000466926.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593162.1	C19orf52-003	368	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,425 bps, Translation length: 260 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BSF4

CCDS

This transcript is a member of the Human CCDS set: CCDS12252

Version

ENST00000270502.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452635 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.