Transcript: ENST00000269945.3 DMRTC2-001

Description

DMRT-like family C2 [Source:HGNC Symbol;Acc:13911]

Location

Chromosome 19: 42,349,118-42,356,401 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 3544 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSG00000142025.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269945.3	DMRTC2-001	1792	367aa	ENSP00000269945.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33034	M0QZH7 M0R1Z9 M0R2D7 Q8IXT2	NM_001040283.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000596827.1	DMRTC2-003	1675	418aa	ENSP00000469525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DX56 M0QZH7 M0R1Z9 M0R2D7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000596660.1	DMRTC2-007	566	161aa	ENSP00000470553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZH7 M0R1Z9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600017.1	DMRTC2-004	559	165aa	ENSP00000472488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZH7 M0R1Z9 M0R2D7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000596258.1	DMRTC2-006	556	134aa	ENSP00000472215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1Z9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601660.1	DMRTC2-002	3076	224aa	ENSP00000472159.1	Nonsense mediated decay		M0R1Z9 Q8IXT2	-	-
ENST00000602098.1	DMRTC2-005	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599022.1	DMRTC2-008	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,792 bps, Translation length: 367 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IXT2

CCDS

This transcript is a member of the Human CCDS set: CCDS33034

Version

ENST00000269945.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000463045 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000269945.3 DMRTC2-001

Summary